* Compiler changes (extensions)

* Generated changes (extensions)

* Library changes (extensions)

* Adjusted a summary to indicate ContainingType can be null for extensions

* Compiler changes (custom option review + access level review)

* Generated code changes (custom options + access review)

* Library changes (custom options + access review)

* Support C# 6 with library changes

* Access HasValue by property

* Set access level of all extension classes to internal (revert in next PR)

* Added null checks to custom options

* Rebase on master and regenerate Conformance

* Removed second dictionary from ExtensionSet

* Rebased compiler changes

* Rebased generated code changes

* Rebased library changes + review changes

* Add more safety checks to extension accessors

* Remove instances where extension sets were unnecessarily allocated

* Remove cleared items from sets
Empty sets are now made null
IExtensionMessage -> IExtendableMessage

* Remove dead code from IExtensionValue impls

* Clean both repeated and single value extensions

* Add GetOrRegister method for repeated fields and allow clearing repeated extensions

* Add type safe ClearExtension methods, remove non-generic IExtendableMessage interface.

* Simplify ExtensionSet.TryMergeFieldFrom

* Rebase on master to resolve conflicts

* Fix Makefile.am

* Add ObjectIntPair to Makefile.am

* Add conformance test for nested listvalue

* Fix upb for parsing repeated Value/ListValue

* Add failed repeated ListValue conformance test into php failure list

* Modify how end tags are encounted in merge code (compiler)

* Modify how end tags are encounted in merge code (generated)

* Modify how end tags are encounted in merge code (library)

* Regenerate generated code through generate_descriptor_proto.sh

* Modify how end tags are encounted in merge code (compiler)

* Modify how end tags are encounted in merge code (generated)

* Modify how end tags are encounted in merge code (library)

* Regenerate generated code through generate_descriptor_proto.sh

* Down-integrate internal changes to github.

* fix python conformance test

* fix csharp conformance test

* add back java map_lite_test.proto's optimize for option

* fix php conformance test

Add group support for proto2

* Compiler changes

* Generated code changes

* Library changes

* Compiler style changes

* Generated style changes

* Fix Windows build errors

* Implement changes from review

* Reintroduce proto2 check

* Compiler changes (required handling review)

* Generated code changes (required handling review)

* Library changes (required handling review

* Field presence rewrite (compiler changes)

* Field presence rewrite (generated code changes)

* Compiler comment

* IFieldAccessor.HasValue library implementation

* Remove Clear methods and default values from proto3 code (Compiler)

* Remove Clear methods and default values from proto3 code (Generated)

* Remove Clear methods and default values from proto3 code (Library)

* Fix distcheck error

* Rewrite default string values to use base64 and convert

* Library changes (IMessage2)

* Compiler changes (IMessage2)

* Generated changes (IMessage2)

* Rebased and regenerated

* Compiler changes (initialized extension)

* Generated changes (initialized extension)

* Library changes (initialized extension)

* Refactor MessageExtensions.IsRequired

* Move string default value creator and bytes default value creator back to seperate methods

* Dead code cleanup

* Fixed segmentation fault
Removed unused header method declarations

This is primarily for access to comments, which would be expected to be available in a protoc plugin.

The implementation has two fiddly aspects:

- We use a Lazy<T> to avoid building the map before cross-linking. An alternative would be to crosslink at the end of the constructor, and remove the calls to CrossLink elsewhere. This would be generally better IMO, but deviate from the Java code.
- The casts to IReadOnlyList<DescriptorBase> are unfortunate. They'll always work, because these lists are always ReadOnlyCollection<T> for a descriptor type... but we can't use IList<DescriptorBase> as that's not covariant, and it's annoyingly fiddly to change the field to be of type ReadOnlyCollection<T>.

* Edited MessageFieldGenerator to clone to backing field instead of property

* Generated C# proto code

Add preserve UnknownFields
Compare floating point values bitwise
Add auto-generated header to C# generated files

* Add auto-generated header to C# generated files

* regenerate C# protos

 Add unknown field support for csharp

With this in place, all tests should pass.

Fixes #3725.

If messages A and B have the same oneof case, which is a message
type, and we merge B into A, those sub-messages should be merged.

Fixes #3200.

Note that I haven't regenerated all the code, as some of the protos
have been changed, breaking generation.

There might be duplicated enum values when allow_alias is true. Add PreferredAlias into OriginalNameAttribute to remove the duplication (#2727)

This consists of:
- Changing the codegen for the fixed set of options protos, to parse unknown fields instead of skipping them
- Add a new CustomOptions type in the C# support library
- Expose CustomOptions properties from the immutable proto wrappers in the support library

Only single-value options are currently supported, and fetching options values requires getting the type right
and knowing the field number. Both of these can be addressed at a later time.

Fixes #2143, at least as a first pass.

* Factored Conformance test messages into shared test schema.

* Updated benchmarks to use new proto3 message locations.

* Fixed include path.

* Conformance: fixed include of Python test messages.

* Make maven in Rakefile use --batch-mode.

* Revert changes to benchmarks.

On second thought I think a separate schema for
CPU benchmarking makes sense.

* Try regenerating C# protos for new test protos.

* Removed benchmark messages from test proto.

* Added Jon Skeet's fixes for C#.

* Removed duplicate/old test messages C# file.

* C# fixes for test schema move.

* Fixed C# to use the correct TestAllTypes message.

* Fixes for Objective C test schema move.

* Added missing EXTRA_DIST file.

JSON tests fail, as we're not using OriginalNameAttribute yet.

Conflicts:
	csharp/src/Google.Protobuf/JsonFormatter.cs

"valueField": null

is parsed appropriately, i.e. that it remembers that the field is set.

This fixes issue #933, effectively.

On deserialization, missing values for message types
are replaced with a "default" message.

Generated code changes for previous commit (basically InternalBuildGeneratedFileFrom => FromGeneratedCode)