Cherry-picked Ruby fix and incremented version number

This commit adds a __wrap_memcpy function and a linker flag to use that
in place of memcpy for our Ruby gem C extension. This allows us to
always use the 2.2.5 version of memcpy, making it possible to use the
gem on distributions with pre-2.14 versions of glibc.

Before this change:
$ objdump -T protobuf_c.so | grep memcpy
0000000000000000      DF *UND*  0000000000000000  GLIBC_2.3.4 __memcpy_chk
0000000000000000      DF *UND*  0000000000000000  GLIBC_2.14  memcpy

After:
$ objdump -T protobuf_c.so | grep memcpy
0000000000000000      DF *UND*  0000000000000000  GLIBC_2.2.5 memcpy
0000000000000000      DF *UND*  0000000000000000  GLIBC_2.3.4 __memcpy_chk
0000000000042450 g    DF .text  0000000000000005  Base __wrap_memcpy

This is based on gRPC's solution to a similar problem:
https://github.com/grpc/grpc/blob/5098508d2d41a116113f7e333c516cd9ef34a943/src/core/lib/support/wrap_memcpy.c

This fixes issue #2783.

Disable static analyzer for message semaphore creation

- Don't prune the extension registry as that can lead to failures when two
  threads are racing.
- If adding the method fails, check and see if it already is bound to decide
  the return result. Deals with threading races binding the methods.

--[name]_opt support depended on the plugin being register, and didn't support
working with just --[name]_out directive (where the plugin is found via the
users PATH. This extends the command line handing to allow --[name]_out to
be all it takes for the _opt directive to also be supported.

Fixes https://github.com/google/protobuf/issues/2712

Fix libprotoc.cmake to generate well_known_types_embed.cc

Ruby: build packages for Ruby 2.4.

Unfortunate typo. Just one extra ',' symbol, has led to the hidden implicit behavior.

Now everything will be fine.

in order to be wire compatible.

Cherry-pick Objc changes

- The Timestamp proto does not allow for negative nanos fields, so the seconds
  must be shifted and a positive nanos then applied.
- Tweak the helpers on Duration to make it clear there is no "base" time
  involved.
- Update the unittests for duration and timestamp to cover positive and
  negative NSTimeIntervals and what their impact is on the protos.

The Protobuf library doesn’t require the 7.1 deployment target so
reverting it back to 7.0

* Update upb, fixes some bugs (including a hash table problem).

* Ruby: added a test for the previous hash table corruption.

Verified that this triggers the bug in the currently released
version.

* Ruby: bugfix for SEGV.

* Ruby: removed old code for dup'ing defs.

To make the test pass I needed to fix out-of-tree builds and update
EXTRA_DIST and CLEANFILES.

* Fix generation of extending nested messages in JavaScript

* Added missing test8.proto to build

- If setting/clearing a repeated field/map that was objects, check the class
  before checking the autocreator.
- Just to be paranoid, don’t mutate within copy/mutableCopy for the autocreated
  classes to ensure there is less chance of issues if someone does something
  really crazy threading wise.
- Some more tests for the internal AutocreatedArray/AutocreatedDictionary
  classes to ensure things are working as expected.
- Add Xcode 8.2 to the full_mac_build.sh supported list.

Pull request #2517 caused cross compilations to start failing, because
the js_embed binary was being built to run on the target platform
instead of on the build machine. This change updates the Autotools build
to use the AX_PROG_CXX_FOR_BUILD macro to find a suitable compiler for
the build machine and always use that when building js_embed.

Restore include style fix (e3da722b) that has been trampled by
auto-generation of well_known_types_embed.cc

embed.cc: In function ‘std::string CEscape(const string&)’:
embed.cc:51:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for (int i = 0; i < str.size(); ++i) {
                                ^

* fix int64 decoding

* fix int64 decoding + tests

Bump version number to 3.2.0