add pass skeletons

add test framework

stuff wired up

benchmark segfault for 5M nodes. fun

make traverse_nodes not recursive

print timings on benchmark

unit test for pass manager

cmake/clang_4_0_flags.cmake

@@ -24,7 +24,7 @@ set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -Wno-global-constructors")
 # set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -Wno-gnu-zero-variadic-macro-arguments")
 # set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -Wno-undef")
 set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -Wno-exit-time-destructors")
-# set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -Wno-missing-prototypes")
+set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -Wno-missing-prototypes")
 # set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -Wno-disabled-macro-expansion")
 # set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -Wno-pedantic")
 # set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -Wno-documentation")

src/CMakeLists.txt

@@ -33,12 +33,17 @@ set (SRC
     types/element_type.cpp
     types/type.cpp
     ngraph/node.cpp
-    ngraph/topological_sort.cpp
     ngraph/visualize.cpp
-)
+    ngraph/pass/pass.cpp
+    ngraph/pass/manager.cpp
+    ngraph/pass/call_pass.cpp
+    ngraph/pass/tree_pass.cpp
+    ngraph/pass/topological_sort.cpp
+    ngraph/pass/propagate_types.cpp
+    )
 
-set(NGRAPH_INCLUDE_PATH 
-    ${CMAKE_CURRENT_SOURCE_DIR} 
+set(NGRAPH_INCLUDE_PATH
+    ${CMAKE_CURRENT_SOURCE_DIR}
     ${CMAKE_CURRENT_SOURCE_DIR}/ngraph
 )
 
@@ -64,22 +69,22 @@ endif()
 # Installation logic...
 #-----------------------------------------------------------------------------------------------
 
-# Default installation location for cmake usually is /usr/include or /usr/local/include 
-# which requires sudo access on most servers. Also, this creates a problem for the shared 
+# Default installation location for cmake usually is /usr/include or /usr/local/include
+# which requires sudo access on most servers. Also, this creates a problem for the shared
 # development systems (e.g., build servers).
 #
 # Therefore we are setting the installation directory so that by defult "make install"
 # won't override artifacts generated by other users.
-# 
+#
 # The user can always override this by using the cmake command listed below.
 set(CMAKE_INSTALL_PREFIX "$ENV{HOME}/ngraph_dist" CACHE PATH "Install directory" FORCE)
 message (STATUS "Installation directory: ${CMAKE_INSTALL_PREFIX}")
 message (STATUS "To Override use: cmake -DCMAKE_INSTALL_PREFIX=/foo -P cmake_install.cmake")
 
 install(TARGETS ngraph DESTINATION ${CMAKE_INSTALL_PREFIX})
-install(DIRECTORY 
-    ${CMAKE_CURRENT_SOURCE_DIR}/ngraph 
-    DESTINATION ${CMAKE_INSTALL_PREFIX} 
+install(DIRECTORY
+    ${CMAKE_CURRENT_SOURCE_DIR}/ngraph
+    DESTINATION ${CMAKE_INSTALL_PREFIX}
     FILES_MATCHING PATTERN "*.hpp"
 )
 

src/ngraph/element_type.hpp

@@ -45,6 +45,7 @@ namespace ngraph
 
             bool operator==(const Type& other) const;
             bool operator!=(const Type& other) const { return !(*this == other); }
+            friend std::ostream& operator<<(std::ostream&, const Type&);
 
         private:
             static std::map<std::string, Type> m_element_list;

src/ngraph/node.hpp

@@ -64,6 +64,7 @@ namespace ngraph
         void assign_tensors();
 
         const Nodes& get_arguments() const { return m_arguments; }
+        void clear_arguments() { m_arguments.clear(); }
 
         const std::multiset<Node*>& users() const { return m_users; }
 
@@ -94,8 +95,8 @@ namespace ngraph
         }
 
         // Set the value type if it has not already been set; otherwise, ensure that
-        // value_type agrees with the value type that was set. 
-        // This is used when the framework specifies a value type for the value, and we 
+        // value_type agrees with the value type that was set.
+        // This is used when the framework specifies a value type for the value, and we
         // independently compute what we thing the value type should be from the arguments.
         void set_value_type_checked(const std::shared_ptr<ValueType>& value_type);
 

src/ngraph/pass/call_pass.cpp

+// ----------------------------------------------------------------------------
+// Copyright 2017 Nervana Systems Inc.
+// Licensed under the Apache License, Version 2.0 (the "License");
+// you may not use this file except in compliance with the License.
+// You may obtain a copy of the License at
+//
+//      http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// ----------------------------------------------------------------------------
+
+#include "call_pass.hpp"

src/ngraph/pass/call_pass.hpp

+// ----------------------------------------------------------------------------
+// Copyright 2017 Nervana Systems Inc.
+// Licensed under the Apache License, Version 2.0 (the "License");
+// you may not use this file except in compliance with the License.
+// You may obtain a copy of the License at
+//
+//      http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// ----------------------------------------------------------------------------
+
+#pragma once
+
+#include <list>
+
+#include "pass.hpp"
+
+namespace ngraph
+{
+    namespace pass
+    {
+        class CallBase;
+    }
+
+    class Node;
+}
+
+class ngraph::pass::CallBase : public Base
+{
+public:
+    virtual ~CallBase() {}
+
+    virtual bool run_on_call_list(std::list<Node*>) = 0;
+private:
+};

src/ngraph/pass/manager.cpp

+// ----------------------------------------------------------------------------
+// Copyright 2017 Nervana Systems Inc.
+// Licensed under the Apache License, Version 2.0 (the "License");
+// you may not use this file except in compliance with the License.
+// You may obtain a copy of the License at
+//
+//      http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// ----------------------------------------------------------------------------
+
+#include <iostream>
+#include <memory>
+
+#include "manager.hpp"
+#include "ngraph/node.hpp"
+#include "log.hpp"
+
+using namespace std;
+
+ngraph::pass::Manager::Manager()
+{
+}
+
+ngraph::pass::Manager::~Manager()
+{
+}
+
+void ngraph::pass::Manager::initialize_default_passes()
+{
+}
+
+void ngraph::pass::Manager::register_pass(std::shared_ptr<TreeBase> p)
+{
+    if (p == nullptr)
+    {
+        throw invalid_argument("null pass registered");
+    }
+    m_tree_passes.push_back(p);
+}
+
+void ngraph::pass::Manager::register_pass(std::shared_ptr<CallBase> p)
+{
+    if (p == nullptr)
+    {
+        throw invalid_argument("null pass registered");
+    }
+    m_call_passes.push_back(p);
+}
+
+void ngraph::pass::Manager::run_passes(std::shared_ptr<Node> nodes)
+{
+    for (shared_ptr<TreeBase> p : m_tree_passes)
+    {
+        p->run_on_tree(nodes);
+        if (p->call_graph_produced())
+        {
+            m_sorted_list = p->get_call_graph();
+        }
+    }
+
+    for (shared_ptr<CallBase>& p : m_call_passes)
+    {
+        p->run_on_call_list(m_sorted_list);
+    }
+}
+
+const std::list<ngraph::Node*>& ngraph::pass::Manager::get_sorted_list() const
+{
+    return m_sorted_list;
+}

src/ngraph/pass/manager.hpp

+// ----------------------------------------------------------------------------
+// Copyright 2017 Nervana Systems Inc.
+// Licensed under the Apache License, Version 2.0 (the "License");
+// you may not use this file except in compliance with the License.
+// You may obtain a copy of the License at
+//
+//      http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// ----------------------------------------------------------------------------
+
+#pragma once
+
+#include <vector>
+
+#include "call_pass.hpp"
+#include "tree_pass.hpp"
+
+namespace ngraph
+{
+    namespace pass
+    {
+        class Manager;
+    }
+
+    class Node;
+}
+
+class ngraph::pass::Manager
+{
+public:
+    Manager();
+    ~Manager();
+
+    void initialize_default_passes();
+
+    void register_pass(std::shared_ptr<TreeBase>);
+    void register_pass(std::shared_ptr<CallBase>);
+
+    void run_passes(std::shared_ptr<Node> nodes);
+
+    const std::list<Node*>& get_sorted_list() const;
+
+private:
+    std::vector<std::shared_ptr<TreeBase>>  m_tree_passes;
+    std::vector<std::shared_ptr<CallBase>>  m_call_passes;
+    std::list<Node*>                        m_sorted_list;
+};

src/ngraph/pass/pass.cpp

+// ----------------------------------------------------------------------------
+// Copyright 2017 Nervana Systems Inc.
+// Licensed under the Apache License, Version 2.0 (the "License");
+// you may not use this file except in compliance with the License.
+// You may obtain a copy of the License at
+//
+//      http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// ----------------------------------------------------------------------------
+
+#include "pass.hpp"

src/ngraph/pass/pass.hpp

+// ----------------------------------------------------------------------------
+// Copyright 2017 Nervana Systems Inc.
+// Licensed under the Apache License, Version 2.0 (the "License");
+// you may not use this file except in compliance with the License.
+// You may obtain a copy of the License at
+//
+//      http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// ----------------------------------------------------------------------------
+
+#pragma once
+
+namespace ngraph
+{
+    namespace pass
+    {
+        class Base;
+    }
+}
+
+class ngraph::pass::Base
+{
+public:
+private:
+};

src/ngraph/pass/propagate_types.cpp

+// ----------------------------------------------------------------------------
+// Copyright 2017 Nervana Systems Inc.
+// Licensed under the Apache License, Version 2.0 (the "License");
+// you may not use this file except in compliance with the License.
+// You may obtain a copy of the License at
+//
+//      http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// ----------------------------------------------------------------------------
+
+#include <sstream>
+
+#include "propagate_types.hpp"
+#include "ngraph/ngraph.hpp"
+
+using namespace std;
+using namespace ngraph;
+
+bool pass::PropagateTypes::run_on_call_list(std::list<Node*> node_list)
+{
+    for (Node* node : node_list)
+    {
+        try
+        {
+            node->propagate_types();
+        }
+        catch (exception& e)
+        {
+            stringstream ss;
+            ss << "Error with node " << *node << ": ";
+            ss << e.what();
+            throw invalid_argument(ss.str());
+        }
+    }
+    return false;
+}

src/ngraph/pass/propagate_types.hpp

+// ----------------------------------------------------------------------------
+// Copyright 2017 Nervana Systems Inc.
+// Licensed under the Apache License, Version 2.0 (the "License");
+// you may not use this file except in compliance with the License.
+// You may obtain a copy of the License at
+//
+//      http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// ----------------------------------------------------------------------------
+
+#pragma once
+
+#include "call_pass.hpp"
+
+namespace ngraph
+{
+    namespace pass
+    {
+        class PropagateTypes;
+    }
+    class Node;
+}
+
+class ngraph::pass::PropagateTypes : public CallBase
+{
+public:
+    virtual bool run_on_call_list(std::list<Node*>) override;
+
+private:
+};

src/ngraph/topological_sort.cpp → src/ngraph/pass/topological_sort.cpp

@@ -18,20 +18,21 @@
 #include "topological_sort.hpp"
 #include "node.hpp"
 #include "util.hpp"
+#include "log.hpp"
 
 using namespace ngraph;
 using namespace std;
 
-void ngraph::TopologicalSort::process(node_ptr p)
+bool ngraph::pass::TopologicalSort::run_on_tree(std::shared_ptr<Node> p)
 {
     deque<Node*> independent_nodes;
     unordered_map<Node*, size_t> node_depencency_count;
 
-    traverse_nodes(p, [&](node_ptr node) {
-        node_depencency_count[node.get()] = node->get_arguments().size();
+    traverse_nodes(p, [&](Node* node) {
+        node_depencency_count[node] = node->get_arguments().size();
         if (node->get_arguments().size() == 0)
         {
-            independent_nodes.push_back(node.get());
+            independent_nodes.push_back(node);
         }
     });
 
@@ -51,14 +52,11 @@ void ngraph::TopologicalSort::process(node_ptr p)
             }
         }
     }
-}
 
-const std::list<Node*>& ngraph::TopologicalSort::get_sorted_list() const
-{
-    return m_sorted_list;
+    return false;
 }
 
-std::list<Node*>& ngraph::TopologicalSort::get_sorted_list()
+std::list<Node*> ngraph::pass::TopologicalSort::get_call_graph() const
 {
     return m_sorted_list;
 }

src/ngraph/topological_sort.hpp → src/ngraph/pass/topological_sort.hpp

@@ -17,24 +17,27 @@
 #include <memory>
 #include <list>
 
+#include "tree_pass.hpp"
+
 namespace ngraph
 {
-    class TopologicalSort;
+    namespace pass
+    {
+        class TopologicalSort;
+    }
     class Node;
-    using node_ptr = std::shared_ptr<Node>;
 }
 
-class ngraph::TopologicalSort
+class ngraph::pass::TopologicalSort : public TreeBase
 {
 public:
     TopologicalSort() {}
 
-    void                      process(node_ptr);
-    const std::list<Node*>& get_sorted_list() const;
-    std::list<Node*>& get_sorted_list();
-    
-private:
-    void promote_node(Node* n);
+    bool run_on_tree(std::shared_ptr<Node>) override;
 
+    bool call_graph_produced() const override { return true; }
+    std::list<Node*> get_call_graph() const override;
+
+private:
     std::list<Node*> m_sorted_list;
 };

src/ngraph/pass/tree_pass.cpp

+// ----------------------------------------------------------------------------
+// Copyright 2017 Nervana Systems Inc.
+// Licensed under the Apache License, Version 2.0 (the "License");
+// you may not use this file except in compliance with the License.
+// You may obtain a copy of the License at
+//
+//      http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// ----------------------------------------------------------------------------
+
+#include "tree_pass.hpp"

src/ngraph/pass/tree_pass.hpp

+// ----------------------------------------------------------------------------
+// Copyright 2017 Nervana Systems Inc.
+// Licensed under the Apache License, Version 2.0 (the "License");
+// you may not use this file except in compliance with the License.
+// You may obtain a copy of the License at
+//
+//      http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// ----------------------------------------------------------------------------
+
+#pragma once
+
+#include <memory>
+#include <list>
+
+#include "pass.hpp"
+
+namespace ngraph
+{
+    namespace pass
+    {
+        class TreeBase;
+    }
+
+    class Node;
+}
+
+class ngraph::pass::TreeBase : public Base
+{
+public:
+    virtual ~TreeBase() {}
+
+    // return true if changes were made to the tree
+    virtual bool run_on_tree(std::shared_ptr<Node>) = 0;
+
+    virtual bool call_graph_produced() const { return false; }
+    virtual std::list<Node*> get_call_graph() const { return std::list<Node*>(); }
+
+private:
+    std::list<Node*> m_sorted_list;
+};

src/ngraph/type.hpp

@@ -37,6 +37,7 @@ namespace ngraph
 
         /// Add tensor views in depth-first order.
         virtual void collect_tensor_views(std::vector<std::shared_ptr<const TensorViewType>>& views) const = 0;
+        friend std::ostream& operator<<(std::ostream&, const ValueType&);
     };
 
     /// Describes a tensor view; an element type and a shape.
@@ -57,6 +58,8 @@ namespace ngraph
         virtual bool operator==(const ValueType& that) const override;
         virtual void collect_tensor_views(std::vector<std::shared_ptr<const TensorViewType>>& views) const override;
 
+        friend std::ostream& operator<<(std::ostream&, const TensorViewType&);
+
     protected:
         const element::Type& m_element_type;
         Shape                m_shape;
@@ -83,6 +86,7 @@ namespace ngraph
 
         virtual bool operator==(const ValueType& that) const override;
         virtual void collect_tensor_views(std::vector<std::shared_ptr<const TensorViewType>>& views) const override;
+        friend std::ostream& operator<<(std::ostream&, const TupleType&);
 
     protected:
         std::vector<std::shared_ptr<ValueType>> m_element_types;

src/ngraph/visualize.cpp

@@ -31,10 +31,10 @@ Visualize::Visualize(const string& name)
 void Visualize::add(node_ptr p)
 {
     // map<size_t, list<node_ptr>> dependent_nodes;
-    traverse_nodes(p, [&](node_ptr node) {
+    traverse_nodes(p, [&](Node* node) {
         for (auto arg : node->get_arguments())
         {
-            m_ss << add_attributes(arg);
+            m_ss << add_attributes(arg.get());
             m_ss << add_attributes(node);
             m_ss << "    " << arg->get_node_id() << " -> " << node->get_node_id();
             m_ss << ";\n";
@@ -42,7 +42,7 @@ void Visualize::add(node_ptr p)
     });
 }
 
-std::string Visualize::add_attributes(node_ptr node)
+std::string Visualize::add_attributes(const Node* node)
 {
     string rc;
     if (!contains(m_nodes_with_attributes, node))
@@ -53,7 +53,7 @@ std::string Visualize::add_attributes(node_ptr node)
     return rc;
 }
 
-std::string Visualize::get_attributes(node_ptr node)
+std::string Visualize::get_attributes(const Node* node)
 {
     stringstream ss;
     if (node->is_parameter())

src/ngraph/visualize.hpp

@@ -36,10 +36,10 @@ public:
     void save_dot(const std::string& path) const;
 
 private:
-    std::string add_attributes(node_ptr node);
-    std::string get_attributes(node_ptr node);
+    std::string add_attributes(const Node* node);
+    std::string get_attributes(const Node* node);
 
-    std::stringstream  m_ss;
-    std::string        m_name;
-    std::set<node_ptr> m_nodes_with_attributes;
+    std::stringstream     m_ss;
+    std::string           m_name;
+    std::set<const Node*> m_nodes_with_attributes;
 };

src/types/element_type.cpp

@@ -14,8 +14,10 @@
 
 #include <cassert>
 #include <cmath>
+#include <iostream>
 
 #include "ngraph/element_type.hpp"
+#include "log.hpp"
 
 using namespace ngraph;
 
@@ -30,6 +32,7 @@ ngraph::element::Type::Type(size_t             bitwidth,
     , m_is_signed{is_signed}
     , m_cname{cname}
 {
+    INFO << m_cname;
     assert(m_bitwidth % 8 == 0);
 }
 
@@ -48,3 +51,9 @@ size_t ngraph::element::Type::size() const
 {
     return std::ceil((float)m_bitwidth / 8.0);
 }
+
+std::ostream& ngraph::element::operator<<(std::ostream& out, const ngraph::element::Type& obj)
+{
+    // out << "ElementType(" << obj.c_type_string() << ")";
+    return out;
+}
\ No newline at end of file

src/types/type.cpp

@@ -54,7 +54,26 @@ bool TupleType::operator==(const ValueType& that) const
 
 void TupleType::collect_tensor_views(std::vector<std::shared_ptr<const TensorViewType>>& views) const
 {
-    for(auto elt : m_element_types){
+    for(auto elt : m_element_types)
+    {
         elt->collect_tensor_views(views);
     }
 }
+
+std::ostream& ngraph::operator<<(std::ostream& out, const ValueType& obj)
+{
+    out << "ValueType()";
+    return out;
+}
+
+std::ostream& ngraph::operator<<(std::ostream& out, const TensorViewType& obj)
+{
+    out << "TensorViewType(" << obj.m_element_type << ")";
+    return out;
+}
+
+std::ostream& ngraph::operator<<(std::ostream& out, const TupleType& obj)
+{
+    out << "TupleType()";
+    return out;
+}

src/util.cpp

@@ -14,9 +14,13 @@
 
 #include <iomanip>
 #include <map>
+#include <deque>
+#include <forward_list>
+#include <unordered_set>
 
 #include "util.hpp"
 #include "ngraph/node.hpp"
+#include "log.hpp"
 
 using namespace std;
 
@@ -131,24 +135,37 @@ size_t ngraph::hash_combine(const std::vector<size_t>& list)
     return seed;
 }
 
-static void traverse_nodes(std::shared_ptr<ngraph::Node>                      p,
-                           std::function<void(std::shared_ptr<ngraph::Node>)> f,
-                           std::set<size_t>&                                  instances_seen)
+void ngraph::traverse_nodes(const std::shared_ptr<ngraph::Node>& p,
+                            std::function<void(Node*)>           f)
 {
-    f(p);
-    for (auto arg : p->get_arguments())
+    std::unordered_set<Node*> instances_seen;
+    deque<Node*> stack;
+    stack.push_front(p.get());
+
+    while (stack.size() > 0)
     {
-        if (instances_seen.find(arg->get_instance_id()) == instances_seen.end())
+        Node* n = stack.front();
+        if (instances_seen.find(n) == instances_seen.end())
         {
-            instances_seen.insert(arg->get_instance_id());
-            traverse_nodes(arg, f, instances_seen);
+            instances_seen.insert(n);
+            f(n);
         }
+        stack.pop_front();
+        for (auto arg : n->get_arguments()) { stack.push_front(arg.get()); }
     }
 }
 
-void ngraph::traverse_nodes(std::shared_ptr<ngraph::Node>                      p,
-                            std::function<void(std::shared_ptr<ngraph::Node>)> f)
+void ngraph::free_nodes(shared_ptr<Node> p)
 {
-    std::set<size_t> instances_seen;
-    ::traverse_nodes(p, f, instances_seen);
+    std::deque<Node*> sorted_list;
+
+    traverse_nodes(p, [&](Node* n)
+    {
+        sorted_list.push_front(n);
+    });
+
+    for (Node* n : sorted_list)
+    {
+        n->clear_arguments();
+    }
 }

src/util.hpp

@@ -195,5 +195,7 @@ namespace ngraph
         return a * b;
     }
 
-    void traverse_nodes(std::shared_ptr<Node> p, std::function<void(std::shared_ptr<Node>)> f);
+    void traverse_nodes(const std::shared_ptr<Node>& p, std::function<void(Node*)> f);
+
+    void free_nodes(std::shared_ptr<Node>);
 } // end namespace ngraph

test/CMakeLists.txt

@@ -16,7 +16,7 @@ include_directories(
     ${GTEST_INCLUDE_DIR}
     ${EIGEN_INCLUDE_DIR}
     )
-    
+
 include_directories(
     ${NGRAPH_INCLUDE_DIR}
     )
@@ -33,6 +33,8 @@ set (SRC
     type_prop.cpp
     util.cpp
     uuid.cpp
+    pass_manager.cpp
+    test_tools.cpp
 )
 
 set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11")
@@ -48,4 +50,3 @@ add_dependencies(unit-test ngraph libgtest eigen)
 add_custom_target(check
 	COMMAND ${PROJECT_BINARY_DIR}/test/unit-test
 	DEPENDS unit-test)
-

test/pass_manager.cpp

+// ----------------------------------------------------------------------------
+// Copyright 2017 Nervana Systems Inc.
+// Licensed under the Apache License, Version 2.0 (the "License");
+// you may not use this file except in compliance with the License.
+// You may obtain a copy of the License at
+//
+//      http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// ----------------------------------------------------------------------------
+
+#include <memory>
+#include <sstream>
+#include <string>
+#include <vector>
+
+#include "gtest/gtest.h"
+
+#include "ngraph/pass/topological_sort.hpp"
+#include "ngraph/pass/propagate_types.hpp"
+#include "ngraph/pass/manager.hpp"
+#include "ngraph/ngraph.hpp"
+#include "test_tools.hpp"
+
+using namespace ngraph;
+using namespace std;
+
+// TEST(pass_manager, add)
+// {
+//     pass::Manager pass_manager;
+//     auto          topological_sort = make_shared<pass::TopologicalSort>();
+//     auto          propagate_types = make_shared<pass::PropagateTypes>();
+
+//     pass_manager.register_pass(topological_sort);
+//     pass_manager.register_pass(propagate_types);
+
+//     auto graph = make_test_graph();
+//     size_t node_count = get_node_count(graph);
+//     pass_manager.run_passes(graph);
+//     auto sorted = pass_manager.get_sorted_list();
+//     EXPECT_EQ(node_count, sorted.size());
+//     EXPECT_TRUE(validate_list(sorted));
+// }

test/test_tools.cpp

+// ----------------------------------------------------------------------------
+// Copyright 2017 Nervana Systems Inc.
+// Licensed under the Apache License, Version 2.0 (the "License");
+// you may not use this file except in compliance with the License.
+// You may obtain a copy of the License at
+//
+//      http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// ----------------------------------------------------------------------------
+
+#include <algorithm>
+
+#include "test_tools.hpp"
+#include "ngraph/ngraph.hpp"
+#include "util.hpp"
+
+using namespace std;
+using namespace ngraph;
+
+bool validate_list(const list<Node*>& nodes)
+{
+    bool rc = true;
+    for (auto it = nodes.rbegin(); it != nodes.rend(); it++)
+    {
+        auto          node_tmp         = *it;
+        auto          dependencies_tmp = node_tmp->get_arguments();
+        vector<Node*> dependencies;
+        for (shared_ptr<Node> n : dependencies_tmp)
+        {
+            dependencies.push_back(n.get());
+        }
+        auto tmp = it++;
+        for (; tmp != nodes.rend(); tmp++)
+        {
+            auto dep_tmp = *tmp;
+            auto found   = find(dependencies.begin(), dependencies.end(), dep_tmp);
+            if (found != dependencies.end())
+            {
+                dependencies.erase(found);
+            }
+        }
+        if (dependencies.size() > 0)
+        {
+            rc = false;
+        }
+    }
+    return rc;
+}
+
+shared_ptr<Node> make_test_graph()
+{
+    auto arg_0 = make_shared<op::Parameter>(element::Float32::element_type(), Shape{1});
+    auto arg_1 = make_shared<op::Parameter>(element::Float32::element_type(), Shape{1});
+    auto arg_2 = make_shared<op::Parameter>(element::Float32::element_type(), Shape{1});
+    auto arg_3 = make_shared<op::Parameter>(element::Float32::element_type(), Shape{1});
+    auto arg_4 = make_shared<op::Parameter>(element::Float32::element_type(), Shape{1});
+    auto arg_5 = make_shared<op::Parameter>(element::Float32::element_type(), Shape{1});
+
+    auto t0 = make_shared<op::Add>(arg_0, arg_1);
+    auto t1 = make_shared<op::Dot>(t0, arg_2);
+    auto t2 = make_shared<op::Multiply>(t0, arg_3);
+
+    auto t3 = make_shared<op::Add>(t1, arg_4);
+    auto t4 = make_shared<op::Add>(t2, arg_5);
+
+    auto r0 = make_shared<op::Add>(t3, t4);
+
+    return r0;
+}
+
+size_t get_node_count(std::shared_ptr<Node> n)
+{
+    size_t node_count = 0;
+    traverse_nodes(n, [&](const Node* node) {
+        node_count++;
+    });
+    return node_count;
+}
+

test/test_tools.hpp

+// ----------------------------------------------------------------------------
+// Copyright 2017 Nervana Systems Inc.
+// Licensed under the Apache License, Version 2.0 (the "License");
+// you may not use this file except in compliance with the License.
+// You may obtain a copy of the License at
+//
+//      http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// ----------------------------------------------------------------------------
+
+#pragma once
+
+#include <list>
+#include <memory>
+
+namespace ngraph
+{
+    class Node;
+}
+
+bool validate_list(const std::list<ngraph::Node*>& nodes);
+std::shared_ptr<ngraph::Node> make_test_graph();
+size_t get_node_count(std::shared_ptr<ngraph::Node> n);

test/topological_sort.cpp

@@ -20,43 +20,15 @@
 #include "gtest/gtest.h"
 
 #include "ngraph/ngraph.hpp"
-#include "ngraph/topological_sort.hpp"
+#include "ngraph/pass/topological_sort.hpp"
 #include "ngraph/visualize.hpp"
 #include "util.hpp"
+#include "log.hpp"
+#include "test_tools.hpp"
 
 using namespace std;
 using namespace ngraph;
 
-static bool validate_list(const list<Node*>& nodes)
-{
-    bool rc = true;
-    for (auto it = nodes.rbegin(); it != nodes.rend(); it++)
-    {
-        auto          node_tmp         = *it;
-        auto          dependencies_tmp = node_tmp->get_arguments();
-        vector<Node*> dependencies;
-        for (shared_ptr<Node> n : dependencies_tmp)
-        {
-            dependencies.push_back(n.get());
-        }
-        auto tmp = it++;
-        for (; tmp != nodes.rend(); tmp++)
-        {
-            auto dep_tmp = *tmp;
-            auto found   = find(dependencies.begin(), dependencies.end(), dep_tmp);
-            if (found != dependencies.end())
-            {
-                dependencies.erase(found);
-            }
-        }
-        if (dependencies.size() > 0)
-        {
-            rc = false;
-        }
-    }
-    return rc;
-}
-
 TEST(topological_sort, basic)
 {
     vector<shared_ptr<op::Parameter>> args;
@@ -86,20 +58,73 @@ TEST(topological_sort, basic)
     ASSERT_NE(nullptr, f0);
 
     ASSERT_EQ(2, r0->get_arguments().size());
-    auto op_r0 = static_pointer_cast<Op>(r0);
 
     // Visualize vz;
     // vz.add(r0);
     // vz.save_dot("test.png");
-    TopologicalSort ts;
-    ts.process(r0);
-    auto sorted_list = ts.get_sorted_list();
+    pass::TopologicalSort ts;
+    ts.run_on_tree(r0);
+    auto sorted_list = ts.get_call_graph();
+
+    size_t node_count = get_node_count(r0);
+
+    EXPECT_EQ(node_count, sorted_list.size());
+    EXPECT_TRUE(validate_list(sorted_list));
+}
+
+// TEST(topological_sort, cycle)
+// {
+//     vector<shared_ptr<op::Parameter>> args;
+//     for (int i = 0; i < 10; i++)
+//     {
+//         auto arg = make_shared<op::Parameter>(element::Float32::element_type(), Shape{1});
+//         ASSERT_NE(nullptr, arg);
+//         args.push_back(arg);
+//     }
+
+//     auto add_0 = make_shared<op::Add>(args[0], args[1]);
+//     auto add_1 = make_shared<op::Add>(args[0], args[1]);
+// }
+
+shared_ptr<Node> make_cell(shared_ptr<Node> in_0, shared_ptr<Node> in_1, shared_ptr<Node> in_2)
+{
+    auto t0 = make_shared<op::Dot>(in_0, in_1);
+    auto t1 = make_shared<op::Add>(t0, in_2);
+    auto t2 = make_shared<op::Negative>(t1); // no tanh yet, this will do
+    return static_pointer_cast<Node>(t2);
+}
+
+TEST(benchmark, topological_sort)
+{
+    stopwatch timer;
+    // x[i+1] = tanh(dot(W,x[i])+b)
+    shared_ptr<Node> result;
+    result = make_shared<op::Parameter>(element::Float32::element_type(), Shape{1});
+    for (int i=0; i<1000000; i++)
+    {
+        auto in_1 = make_shared<op::Parameter>(element::Float32::element_type(), Shape{1});
+        auto in_2 = make_shared<op::Parameter>(element::Float32::element_type(), Shape{1});
+        result = make_cell(result, in_1, in_2);
+    }
+
+    auto op_r0 = static_pointer_cast<Op>(result);
+
+    timer.start();
+    pass::TopologicalSort ts;
+    ts.run_on_tree(op_r0);
+    auto sorted_list = ts.get_call_graph();
+    timer.stop();
+    INFO << "topological sort took " << timer.get_milliseconds() << "ms";
 
     size_t node_count = 0;
-    traverse_nodes(r0, [&](node_ptr node) {
+    traverse_nodes(op_r0, [&](const Node* node) {
         node_count++;
     });
 
-    EXPECT_EQ(node_count, sorted_list.size());
-    EXPECT_TRUE(validate_list(sorted_list));
+    INFO << "node count " << node_count;
+
+    timer.start();
+    ngraph::free_nodes(result);
+    timer.stop();
+    INFO << "delete nodes took " << timer.get_milliseconds() << "ms";
 }